Introduction to ecology



1. An introduction to ecology

Ecology is defined as interactions between abiotic (non-living) and biotic (living) components that occur in the environment, these communities of organisms and how they react with each other and other abiotic and biotic factors create an ecosystem, there are two types of ecosystem aquatic and terrestrial. An ecosystem is the community (all living species) as well as their environment that surrounds it, an ecosystem is the main ecological unit containing both abiotic and biotic components through which nutrients are cycled and energy flows. However to permit these cycles the ecosystem must contain a number of interrelationships among its components (water, soil, nutrients, producers, consumers and decomposers) The function of the ecosystem is related to the flow of energy and the cycling of materials through the components of the ecosystem. The total amount of energy that flows through a system depends upon the amount fixed by plants or producers, as energy is transferred from one feeding level to the next, a portion of energy is lost from further transfer. This limits the mass and number of organisms that can be maintained at each feeding level, ecosystems are often broken up according to their positions in a food chain .i.e. their trophic level.  This is explained in the diagram below…Ecosystems tend toward to move towards,maturity. In doing so, they pass from a less complex to a more complex state in a process called succession (Chapman and Reiss, 1999).
Figure 1. Diagram to show trophic levels.


Mechanisms of evolution

The easy way to understand evolution is that evolution is a change in the gene pool of organisms over any given time. Evolution plays an important role in ecosystems and how they run. Some of the mechanisms of evolution are gene flow, genetic drift, natural selection, mutations and descent with modifications. Evolution only occurs when there is a change in gene frequency within a population over a period of time. (Chapman and Reiss, 1999).


Descent with modification refers to passing on traits from parents to their offspring, i.e. hereditary, this is classed as the gene which holds information about any organism for example their behaviour, development and also their appearance. The genes are passed onto each generation, however not exactly the same gene is always passed on, the organisms that are better suited for a particular environment are more likely to pass on their genes, overtime the gene similarities in the population change this is when evolution takes place (Berkley, 2014).
Mutation is a change in DNA. DNA effects how something behaves and how it looks, some mutations cannot be passed onto their offspring so does not affect evolution, however the mutations that do effect evolution are galled germ line mutations these are passed onto offspring. Germ line mutations is the presence of an altered gene within the egg and sperm (Genetics home reference, 2014).
Mutations can happen for different reasons, it can happen due to exposure to certain chemicals .i.e. cigarette smoke or DNA fails to copy accurately. Evolution then takes place due to different DNA passed onto their offspring resulting in different organisms being born (Genetics home reference, 2014).
Gene Flow is basically any movement of genes from one population to another, it can also be called migration. Within a population it can introduce or reintroduce genes to a population, this increases the genetic variation in that population, also moving genes around across a population can make populations genetically similar. It is more likely that two populations will evolve into two species if there is less gene flow (Palomer, 2012).
Genetic Drift is a change in a type of genes in any population due to some completely random occurrence, genetic drift in small populations can result in big changes to organisms but not so much in large populations (Palomer, 2012).


Natural Selection is a theory by Charles Darwin. Darwin’s five theories were
Common descent – organisms are descended from one or several common ancestors and have diversified (variety)
Evolution – Species come and go through time and change until they exist.
Species multiply- The diversification of life involves populations of one species diverging (going in different directions) until they become two different species.
Graduation- Evolutionary changes occur through small changes within a population and natural selection, Evolutionary changes occur through variation between individuals.
Natural selection- evolutionary changes through variation of individuals
(GCSEbitesize, 2014).
In simple terms Darwin’s theory is that all life is related and has descended from a common ancestor and is a slow gradual process.
Darwin’s theory of evolution states that evolution happens by natural selection, the key points are …
·         individuals in a species show a wide range of variation
·         individuals with characteristics most suitable for their environment are therefore more likely to survive and reproduce
·         the genes that allow these individuals to be successful are passed to their offspring




Individuals that are poorly adapted to their environment are less likely to survive and reproduce, this means that their genes are less likely to be passed on to the next generation. Variation can be caused by both the species genes and their environment but it is only variation caused by genes that can be passed onto the next generation (Gcse bitesize, 2014).
However there is evidence to support Darwin’s theory, one key piece of evidence is “Darwin’s finch” (as illustrated in figure 2) on the Galapagos Islands, different species of the same bird live on the island. All the birds have different size and shape beaks, as a result of the island being isolated there is a lack of competition therefore the birds have been able to eat different forms of food without competing with each other. However a common ancestor was found living on the island with whom which the birds all have the same traits their beak being the only exception, therefore these species are evidence of evolution and have adapted to eat different sources of food (Biology online, 2014).

Figure 2: Evolution of Darwin’s finches. Source: www.chs.helena.k12.mt.us

Another key piece of Darwin’s theory was the fossil record which is an ongoing debate between evolutionists. The fossil record shows a history of development between one species and another, at first simple organisms are found, then newer, more complex organisms appear over time. The characteristics of the newer organisms appear to be modified forms of characteristics of the older simpler organisms. The relationships between the simpler to more complicated and new and old life forms is strong evidence of evolution (about religion, 2015).
However the problem with the fossil record is it contains gaps, not all organisms fossilise well and some fossils are destroyed by the earth’s cycles, also some fossils are yet to be discovered. There is one big piece of evidence however which disproves evolution the “Cambrian Explosion”, even Darwin himself stated that it was a big problem for his evolutionary theory (Paleobiology, 2014).
The Cambrian explosion refers to the sudden appearance of a variety of complex animal’s plans with minimal skeletonised remains. It happened about 543 million years ago, scientists refer to the event as an explosion because of the huge amount of evolutionary activity occurred in a short space of time (20 million years) which is a aa short space of time in evolutionary terms, before the Cambrian only soft bodied life forms existed (Biologos, 2014).

The Adaption of Organisms to their Environment
All living organisms must be able to cope with the conditions thrown at them in their environment if they are to survive and reproduce. Conformity between an organism and its environment is called adaption. Adaption has many different factors that organisms must conform to in all aspects of their environment, it is important to remember they not only have abiotic factors to survive .i.e. Water, wind, light and temperature but also biotic factors such as competitors, predators and mates. Adaption has occurred through variation which allows organisms to compete for survival, it can occur by natural selection where organisms with good genetic traits breed more than organisms with not so good traits or by non-genetic changes where organisms become acclimatized to their environment (Chapman and Reiss,1999).
Every organism has certain characteristic or features that allow it to live in its particular environment successfully, these are called adaptations and therefore the organism has adapted to its habitat (as shown in figure 3)
A polar bear is a great example of an organism that has adapted well to its environment in the Artic, the polar bear has
·         a white appearance which acts as camouflage against prey on the snow therefore helps them to catch prey more easily
·         very thick layers of fat and fur to keep them insulated from the cold
·         a greasy coat which sheds water after swimming which helps to keep in the heat also (Gcse, 214).


Figure 3 showing polar bears as an example of adaption source:http://thetodaystuff.blogspot.co.uk/2011/01/polar-bears-wallpapers.html

There are three types of adaptation anatomical, psychological or behavioural. Anatomical is physical features for example an animal’s shape, psychological adaptations are more general functions for example an organisms ability to regulate their temperature and behavioural adaptations can either be inherited or learnt they are the things animals do to survive an example of this is possums who play “dead “ to avoid predators (Ehow,2014).








Table 1: table showing the three types of adaption source:
Table 1 provides a case study for how an organism may be adapted within three distinct categories.















The Importance of population genetics in the conservation of biodiversity

Biodiversity is used to describe the variety of life on earth and all of its natural processes, it means the number of different species living any one area and it is calculated at three different levels, ecosystem diversity, species diversity and genetic diversity.

Ecosystem Biodiversity- refers to the number of ecosystems in an area, an ecosystem is all of the plants and animals and all of its physical components in one area

Genetic Biodiversity- refers to the variability in the gene pool of a community

Species Biodiversity- refers to the number of species living in any one area

Biodiversity is needed to keep the earth enriched with food, wealth and health, it also boosts ecosystem productivity, biodiversity provides raw materials of food and medicine and not only that it protects our planet ensuring a variety of organisms live on. All species have an important role to play, a good example of why biodiversity is so important is if you have a large number of crops, greater species diversity which results in natural support for all life forms therefore resulting in a healthy ecosystem (Global issues, 1998)
The conservation of biodiversity is extremely important for many reasons, agriculture, medicine and ecosystems. In the medicine field researchers are looking more into natural biological resources and many treatment and cures have been found due to the hep of animal and plant species. A big example of this is vincristine which is taken from the rosy periwinkle of Madagascar, which is native to the Indian Ocean island Madagascar and has proved very useful in treating childhood leukaemia (kew,2014).
 
Figure 4 illustrating the magadasgar flower. Source:http://pk-photography.blogspot.co.uk/2008/06/catharanthus-roseus-madagascar.html

Ecosystems are another focus for the conversation of biodiversity, if there is a sudden change in a community’s environment in ecosystem, the balance of the community can change which can ultimately lead to the destruction of the ecosystem which can lead to disastrous effects. The destruction of ecosystems can lead to problems with global levels an example of this being rainforests, rainforests help to regulate climate through photosynthesis by producing oxygen and absorbing carbon dioxide, so by not conserving the rainforest we are contributing to the loss of valuable species and a change in climate (Ypte, 2014). In regards to agriculture farming has always played a part in conserving and creating habitats with a large variety of species, however over the years farming has changed and only the most productive of animals and crops are being grown and reared which ultimately means different varieties of animals and crops are in danger of becoming extinct.
Genetic diversity is extremely important in the conservation of biodiversity, in a population there needs to be a diverse range of genetics if the population is to survive and continue to grow, failure in achieving this results in all the individual organisms of a species being the same which means if a sudden disease was to hit that population the whole of the population would get the disease resulting in possible extinction of that particular species, however if the population had a high genetic diversity the population would have a much higher chance of survival as some of the individuals within that population would have the genes to fight the disease therefore a much less chance of extinction (Ypte, 2014).

There are certain factors that affect genetic diversity….

Mating patterns- when a population interbreeds some organisms choose to breed with others based on certain traits therefore the individuals are making choices in breeding on specific behavioural choices hence why this act is named non-random mating. Non-random mating can occur in two forms both with different outcomes, one form is called inbreeding where certain individuals with similar genetic make-up are more likely to mate with each other, and the second form is called outbreeding where individuals are more likely to mate with individuals with a different genetic makeup (genotype) this leads to an increase in genetic variation (Scitable, 2014)

Migration- is the movement of organisms from one place to another entailing actual physical movement, migration can also involve the movement of alleles (a gene that is found in one of two or more different forms in the same position in a chromosome and produces a particular characteristic which varies between people for example eye colour ) (Cambridge dictionary, 2014) this is a process known as introgression (introduction from one gene complex into another) (Merriam Webster dictionary, 2015). Migration does not always have to involve the physical migration of organisms it may also involve the mating of different species where their geographical locations overlap, this is a migration of alleles from a parent to their offspring although the parents are not members of the same population. This means individuals can move from one place to another in relative to their gene pools or can also enter gene pools they were not part of resulting in a change of gene frequencies in a population (Biology as poetry, 2015).

Genetic Drift- is a basic form of evolution, it is random fluctuations of in the number of gene variants within a population, and it takes place when the occurrence of variant forms of a given gene called alleles (different forms of a gene) decrease or increase by chance over time. Genetic drift tends to happen in smaller populations where infrequent alleles have a greater chance of being lost. In basic terms some individuals leave behind more genes in their descendants than others purely by chance (Understanding evolution, 2015).
Genetic variation in a population results from a large assortment of genes and alleles, the ability of a population being able to survive in their changing environments depends on whether they are able to adapt to external conditions or not (Understanding evolution, 2015).









2. Populations of species


The Congo Basin Rainforest
The Congo rainforest is located in central Africa and is one of the few great ecosystems left on earth, it spans over 500 million acres and is often described as the” lungs of Africa and has the highest level of biodiversity (Animal national, 2013).

Distribution of named plant and animal

It is the world’s second largest rainforest biome with only the Amazon being bigger and has high levels of biodiversity. There are approximately 10,000 species of tropical plants, more than 600 tree species, and 400 species of mammals, 700 species of fish and 1,000 species of birds making up the Congo (Animal national, 2013).
The Congo is situated close to equator which means there is not changing seasons like elsewhere so is generally warm all year round, being close to the equator results in a vast amount of sun, but also a lot of precipitation (rain) these two factors combined together create the perfect conditions for photosynthesis which then in turn creates lots of plants resulting in the rainforest having the perfect environment for thousands of different species. There are two important factors in the rainforest the forest floor and the canopy. The forest floor is covered leafs, fruit and seeds and is humid and dark (receiving only 2% of sunlight) but plays an important part in the forests ecosystem, it is where decomposition takes place, fungi breaks down dead animals and plants and then recycles nutrients and materials. The canopy can sometimes reach heights of up to 30m above the ground and consists of overlapping leafs and branches from trees, scientists estimate that between 60-90% of life found is found in the  canopy of the rainforest (Mongabay, 2004) animals such as birds, monkeys, snakes and lizards. The canopy has a much different environment to the forest floor, it is a lot hotter and drier forest floor during the day and provides sources of food and shelter. The rainforest has a high level of rainfall due to the high humidity, the rain in this particular biome is also most often recycled rain, the heat during the day causes water to evaporate in the air which then form clouds above the Congo’s canopy which then release water in the form of rain back into the rainforest (Bioexpedition, 2013) as a result of this the Congo has the second largest river in the world i.e. the Congo River which drains an area of 3.7 million square kilometres known as the Congo Basin, this is another reason why the Congo is so bio diverse as well as a high diversity of terrestrial species it also has a high biodiversity of aquatic species (Mongabay, 1994).


The Congo River

Species Population

There about 6,000 plant species in the tropical rainforest biome, major forest species of plants include Venus fly traps, ferns, orchids, and Kapok trees also Bromeliads. The canopy of the Congo consist largely of African oak, Red cedar and mahogany , as only 1% of sun reaches the forest floor tall growth is necessary for competition of light , Lianas and Ficus are climbing plants which send their shoots through trees in order to obtain more sunlight.
The forest floor contains small ferns and decomposing leaves due to plants not being able to survive due to the lack of sun however the forest floor is still an important part of the Congo as the decomposition of dead material that occurs on the forest floor helps to provide the nutrients that all other plants need to survive enabling a healthy canopy un the rainforest therefore providing a habitat for the thousands of species that live there ( weebly Congo rainforest, 2015).The Congo consists of a huge variety of flora and with such competition for the same resources it’s important that the Congo flora adapts to their surroundings in order to survive for example roots of flora. In order to be able to support trees of huge heights roots rely on an alternative to depth this is due to rainforest soil retaining nutrients in the top layer therefore requiring that trees use a shallow root system to provide the needed resources (Gcse bitesize, 2014).
Buttress roots grow from the ground up the side of the tree of a height of 2 metres or more and help to anchor the tree to the ground.

Buttress roots


Another adaption of the flora is thin bark, trees in the rainforest have no need to trap moisture with thick bark, as a result of the high humidity the trees actually tend to have thin bark which allows moisture to escape from the trunk, also there is a low risk of parasitic plants being able to grown on the trunk due to the soft texture of bark (Ehow, 2015) The rainforest is also the home of many medicinal plants, on average over 7,000 medicinal products prescribed by doctors originate from plants found in the Congo, some examples are…

The Trumpet Tree- all parts of the tree, flowers, bark, leaves, roots and fruit are used to treat rheumatism and respiratory illnesses

Mammosa-is used to treat sinus infections and lesions formed by skin cancers, it is a member of the eggplant family

Periwinkle-is used widely to treat leukaemia and Hodgkin’s disease

 Cinchona Tree- Quinine is extracted from the bark and used to treat malaria

Lemongrass-has anti-bacterial properties which aid in helping, coughs, fevers and colds, it is also a popular herbal tea.

Cocoa Tree- this is classed as one of the most important rainforest plants due to it producing over 150 chemicals that can be removed from its leaves , bark fruit and seeds, the extracts are then used to help treat coughs, kidney stones, cuts, bruises,, anxiety, fever and fatigue.


There is an extremely high biodiversity of fauna (animal life) in the Congo, the animals have adapted the rainforest as their habitat and live at different levels in the forest for example birds in the canopy and mammals on the forest floor and they all encounter fierce competition for everyday survival. Some examples of the Congo’s inhabitants are...

Poison Dart Frogs-they are brightly coloured and have poisonous skin, they feed on small insects like spiders and flies.
 Blue Poison Dart Frog 3 feature The Brightly Colored, Potentially Lethal Blue Poison Dart Frog
Figure 7 showing a poison dart frog




Monarch Butterfly-are poisonous butterflies that feed on milkweed plants and have bright coloured wings, if they are eaten their predators become sick due to the poison.
 It'saboy.JPG



 Anaconda-is the largest snake in the world and is mostly found in swamps and marshes, it can go without food for almost a year after feasting on a big prey. It feeds on pigs, deer, birds, etc. and hunts mostly at night.
 File:Anaconda Loreto Peru.jpg
Figure 9 showing an anaconda snake. Source: http://commons.wikimedia.org/wiki/File:Anaconda_Loreto_Peru.jpg

Capybara- are the largest rodents and found in swamps, marshes and rivers, they feed on tree bark, fruit and aquatic plants and are found in large groups. They are preyed by anacondas and jaguars.
 The-Capybara


The diversity of the Congo is so huge and is inhabited by some of the greatest species on earth such as giant mountain gorillas and various types of elephants, chimpanzees, jaguars, wild boars and white rhinos. Kingfishers, macaws, hornbills and toucans are the most found bird species.

There are many large animals in the rainforest that are endemic to the Congo which means they only live here and nowhere else, some examples being...
Congo Clawless Otter- which is extremely endangered.
 

Okapi-is a relative of the giraffe and found only in zoos
Forest Elephants-their population has decreased 80% in the last 50 years
Manatee-their only real threat is hunting and loss of habitat by man
Eastern Lowland Gorillas-are the world’s largest primates but about 300 are killed every year for “bush meat” and is the primary threat to the ape populations.
Bonobos- a type of chimpanzee and one of humankind’s closest living relatives
(Ehow, 2014).

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